Cooperation-ProtTech Inc.

  
     
Publications

Note: Following is a partial list of the recent publications containing results generated by ProtTech services.

  • Monickaraj, F., McGuire, P.G., Nitta, C.F., Ghosh, K. and Das, A. Cathepsin D: an Mϕ-derived factor mediating increased endothelial cell permeability with implications for alteration of the blood-retinal barrier in diabetic retinopathy. The FASEB Journal.  December, 2015, doi: 10.1096/fj.15-279802 [Abstract]

  • Kost, G.C., Yang, M.Y., Li, L., Zhang, Y., Liu, C.Y., Kim, D.J., Ahn, C.H., Lee, Y.B. and Liu, Z.R. A novel anti-cancer agent, 1-(3,5-dimethoxyphenyl)-4-[(6-fluoro-2-methoxyquinoxalin-3-yl)aminocarbonyl] piperazine (RX-5902), interferes with β-catenin function through Y593 phospho-p68 RNA helicase. Journal of Cellular Biochemistry. August, 2015, doi: 10.1002/jcb.25113 [Abstract]

  • Wei, H., Brunecky, R., Donohoe, B.S., Ding, S.Y., Ciesielski, P.N., Yang, S., Tucker, M.P. and Himmel, M.E. Identifying the ionically bound cell wall and intracellular glycoside hydrolases in late growth stage Arabidopsis stems: implications for the genetic engineering of bioenergy crops? Frontiers in Plant Science. May, 2015, doi: 10.3389/fpls.2015.00315 [Abstract]

  • Fan, X., Yan, J., Xie, L., Zeng, L., Young III, R.F. and Xie, J. Genomic and proteomic features of mycobacteriophage SWU1 isolated from China soil. Gene. April, 2015, doi: 10.1016/j.gene.2015.02.053 [Abstract]

  • Majerciak, V., Pripuzova, N., Chan, C., Temkin, N., Specht, S.I. and Zheng, Z. M. Stability of structured Kaposi’s sarcoma-associated herpesvirus ORF57 protein is regulated by protein phosphorylation and homodimerization. Journal of Viology. March, 2015, doi: 10.1128/JVI.03721-14 [Abstract]

  • Ardelt, P.U., Ebbing, J., Adams, F., Reiss, C., Arap, W., Pasgualini, R., Bachmann, A., Wetterauer, U., Riedmiller, H. and Kneitz, B. An anti-ubiquitin antibody response in transitional cell carcinoma of the urinary bladder. Plos One. March, 2015, doi: 10.1371/journal.pone.0118646 [Abstract]

  • Feld, G.K., EI-Etr, S., Corzett, M.H., Hunter, M.S., Belhocine, K., Monack, D.M., Frank, M., Segelke, B.W. and Rasley, A. Structure and function of REP34 implicates carboxypeptidase activity in francisella tularensis host cell invasion. The Journal of Biological Chemistry. October, 2014, doi: 10.1074/jbc.M114.599381 [Abstract]

  • Patent US20140235497 A1 Identification of antigen-specific adaptive immune responses using ARM-PCR and high-throughput sequencing, 08/21/2014. [Abstract]

  • Sisco, P.N., Wilson, C.G., Chernak, D., Clark, J.C., Grzincic, E.M., Ako-Asare, K., Goldsmith, E.C. and Murphy, C.J. Adsorption of cellular proteins to polyelectrolyte-functionalized gold nanorods: a mechanism for nanoparticle regulation of cell phenotype? Plos One. February, 2014, doi: 10.1371/journal.pone.0086670 [Abstract]

  • Sangadala, S., Yoshioka, K., Enyo, Y., Liu, Y., Titus, L. and Boden, S.D. Characterization of a unique motif in LIM mineralization protein-1 that interacts with jun activation-domain-binding protein 1. Molecular and Cellular Biochemistry. January, 2014, doi: 10.1007/s11010-013-1823-3 [Abstract]

  • Cayatte, C., Schneider-Ohrum, K., Wang, Z., Irrinki, A., Nguyen, N., Lu, J., Nelson, C., Servat, E., Gemmell, L., Citkowicz, A., Liu, Y., Hayes, G., Woo, J., Van Nest, G., Jin, H., Duke, G. and McCormick A.L. Cytomegalovirus vaccine strain towne-derived dense bodies induce broad cellular immune responses and neutralizing antibodies that prevent infection of fibroblasts and epithelial cells. Journal of Virology. October, 2013, doi: 10.1128/JVI.01554-13 [Abstract]

  • Twomey, M.C., Brooks, J.K., Corey, J.M. and Singh-Cundy, A. Characterization of PhPRP1, a histidine domain arabinogalactan protein from petunia hybrida pistils. Journal of Plant Physiology. October, 2013, doi: 10.1016/j.jplph.2013.05.001 [Abstract]

  • Wei, H., Wang, W., Yarbrough, J.M., Baker, J.O., Laurens, L., Van Wychen, S., Chen, X., Taylor II, L.E., Xu, Q., Himmel, M.E. and Zhang, M. Genomic, proteomic, and biochemical analyses of oleaginous mucor circinelloides: evaluating its capability in utilizing cellulolytic substrates for lipid production. Plos One. September, 2013, doi: 10.1371/journal.pone.0071068 [Abstract]

  • Németh, B.C., Wartmann, T., Halangk, W. and Sahin-Tóth, M. Autoactivation of mouse trypsinogens is regulated by chymotrypsin C via cleavage of the autolysis loop. The Journal of Biological Chemistry. August, 2013, doi: 10.1074/jbc.M13.478800 [Abstract]

  • Yang, D., Lü, X., Hong, Y., Xi, T. and Zhang, D. The molecular mechanism of mediation of adsorbed serum proteins to endothelial cells adhesion and growth on biomaterials. Biomaterials. July, 2013, doi: 10.1016/j.biomaterials.2013.04.028 [Abstract]

  • Basu, D., Castellano, J.M., Thomas, N. and Mishra, R.K. Cell-free protein synthesis and purification of human dopamine D2 receptor long isoform. Biotechnology Progress. May-June, 2013, doi: 10.1002/btpr.1706 [Abstract]

  • Chen, Y.W., Xu, Z., Baksh, A.N., Wang, J.K., Chen, C.Y., Swanson, R., Olson, S.T., Kataoka, H., Johnson, M.D. and Lin, C.Y. Antithrombin regulates matriptase activity involved in plasmin generation, syndecan shedding, and HGF activation in keratinocytes. Plos One. May, 2013, doi: 10.1371/journal.pone.0062826 [Abstract]

  • Wu, C.J., Mannan, P., Lu, M. and Udey, M.C. Epithelial cell adhesion molecule (EpCAM) regulates claudin dynamics and tight junctions. The Journal of Biological Chemistry. April, 2013, doi: 10.1074/jbc.M113.457499 [Abstract]

  • Kim, J. and Copley, S.D. The orphan protein bis-γ-glutamylcystine reductase joins the pyridine nucleotide disulfide reductase family. Biochemistry. April, 2013, doi: 10.1021/bi4003343 [Abstract]

  • Yan, L.J., Thangthaeng, N., Sumien, N. and Forster, M.J. Serum dihydrolipoamide dehydrogenase is a labile enzyme. Journal of Biochemical and Pharmacological Research. March. 1(1):30-42 (2013) [Abstract]

  • Benavides, M., Chow-Tsang, L.F., Zhang, J. and Zhong, H. The novel interaction between microspherule protein Msp58 and ubiquitin E3 ligase EDD regulates cell cycle progression. Biochimica et Biophysica Acta (BBA) – Molecular Cell Research. January, 2013, doi: 10.1016/j.bbamcr.2012.10.007 [Abstract]

  • Robinson, P.M., Smith, T.S., Patel, D., Dave, M., Lewin, A.S., Pi, L., Scott, E.W., Tuli, S.S., Schultz, G.S. Proteolytic processing of connective tissue growth factor in normal ocular tissues and during corneal wound healing. Investigative Ophthalmology & Visual Science. December, 2012, doi: 10.1167/iovs.12-10419 [Abstract]

  • Chang Foreman, H.C., Van Scoy, S., Cheng, T.F. and Reich, N.C. Activation of interferon regulatory factor 5 by site specific phosphorylation. Plos One. March, 2012, doi: 10.1371/journal.pone.0033098 [Abstract]

  • Ramirez-Gomez, F., Greene, W., Rego, K., Hansen, J.D., Costa, G., Kataria, P. and Bromage, E.S. Discovery and characterization of secretory lgD in rainbow trout: secretory lgD is produced through a novel splicing mechanism. The Journal of Immunology. February, 2012, doi: 10.4049/jimmunol.1101938 [Abstract]

  • Bowers, S.L., McFadden, W.A., Borg, T.K. and Baudino, T.A. Desmoplakin is important for proper cardiac cell-cell interactions. Microscopy and Microanalysis. February, 2012, doi: 10.1017/S1431927611012359 [Abstract]

  • Teijeiro, J.M., Roldán, M.L. and Marini, P.E. Molecular identification of the sperm selection involved porcine sperm binding glycoprotein (SBG) as deleted in malignant brain tumors 1 (DMBT1). Biochimie. January, 2012, doi: 10.1016/j.biochi.2011.10.008 [Abstract]

  • Boardman, T., Warner, C., Ramirez-Gomez, F., Matrisciano, J. and Bromage, E. Characterization of an anti-rainbow trout (oncorhynchus mykiss) CD3ɛ monoclonal antibody. Veterinary Immunology and Immunopathology. January, 2012, doi: 10.1016/j.vetimm.2011.11.017 [Abstract]

  • Noren Hooten, N., Kompaniez, K., Barnes, J., Lohani, A. and Evans, M.K. Poly (ADP-ribose) polymerase 1 (PARP-1) binds to 8-oxoguanine-DNA glycosylase (OGG1). The Journal of Biological Chemistry. December, 2011, doi: 10.1074/jbc.M111.255869 [Abstract]

  • Krawczyk, E., Suprynowicz, F.A., Hebert, J.D., Kamonjoh, C.M., Schlegel, R. The human papillomavirus type 16 E5 oncoprotein translocates calpactin I to the perinuclear region. Journal of Virology. November, 2011, doi: 10.1128/JVI.00706-11 [Abstract]

  • Massimelli, M.J., Kang, J.G., Majerciak, V., Le, S.Y., Liewehr, D.J., Steriberg, S.M. and Zheng, Z.M. Stability of a long noncoding viral RNA depends on a 9-nt core element at the RNA 5’ end to interact with viral ORF57 and cellular PABPC1. International Journal of Biological Sciences. October, 2011, doi: 10.7150/ijbs.7.1145 [Abstract]

  • Dvir-Ginzberg, M., Gagarina, V., Lee, E.J., Booth, R., Gabay, O. and Hall, D.J. Tumor necrosis factor α-mediated cleavage and inactivation of SirT1 in human osteoarthritic chondrocytes. Arthritis & Rheumatism. August, 2011, doi: 10.1002/art.30279 [Abstract]

  • Xiao, X., Feng, Y., Zhu, Z. and Dimitrov, D.S. Identification of a putative Crimean-congo hemorrhagic fever virus entry factor. Biochemical and Biophysical Research Communications. July, 2011, doi: 10.1016/j.bbrc.2011.06.109 [Abstract]

  • Blanco, M.A., Alečković, M., Hua, Y., Li, T., Wei, Y., Xu, Z., Cristea, I.M. and Kang, Y. Identification of staphylococcal nuclease domain-containing 1 (SND1) as a metadherin-interacting protein with metastasis-promoting functions. The Journal of Biological Chemistry. June, 2011, doi: 10.1074/jbc.M111.240077 [Abstract]

  • Fozzatti, L., Lu, C., Kim, D.W. and Cheng, S.Y. Differential recruitment of nuclear coregulators directs the isoform-dependent action of mutant thyroid hormone receptors. Molecular Endocrinology. June, 2011, doi: 10.1210/me.2010-0474 [Abstract]

  • Cao, J., Meng, F., Gao, X., Dong, H. and Yao, W. Expression and purification of a natural N-terminal pre-ligand assembly domain of tumor necrosis factor receptor 1 (TNFR1 PLAD) and preliminary activity determination. The Protein Journal. April, 2011, doi: 10.1007/s10930-011-9330-4 [Abstract]

  • Hutchinson, J.A., Shanware, N.P., Chang, H. and Tibbetts, R.S. Regulations of ribosomal protein S6 phosphorylation by casein kinase 1 and protein phosphatase 1. The Journal of Biological Chemistry. March, 2011, doi: 10.1074/jbc.M110.141754 [Abstract]

  • Thankthaeng, N., Sumien, N., Forster, M.J., Shah, R.A. and Yan, L.J. Nongradient blue native gel analysis of serum proteins and in-gel detection of serum esterase activities. Journal of Chromatography B. February, 2011, doi: 10.1016/j.jchromb.2010.12.026 [Abstract]

  • Stawowczyk, M., Van Scoy, S, Kumar, K.M. and Reich, N.C. The Interferon Stimulated Gene 54 Promotes Apoptosis J. Biol. Chem. December 29, 2010, doi: 10.1074/jbc.M110.207068 [Abstract]

  • Gangaraju, V.K., Yin, H., Weiner, M.M., Wang, J., Huang, X.A. and Lin, H. Drosophila Piwi functions in Hsp90-mediated suppression of phenotypic variation Nature Genetics DOI: doi:10.1038/ng.743 (2010) [Abstract]

  • Kim, S.H., Shanware, N.P., Bowler, M. J. and Tibbetts, R.S. Amyotrophic Lateral Sclerosis-associated Proteins TDP-43 and FUS/TLS Function in a Common Biochemical Complex to Co-regulate HDAC6 mRNA J. Biol. Chem. 285: 34097-34105. (2010) [Abstract]

  • Zhou, G., Liu, Y., Wu, S.Y., Tie, F., Lou, H., Chiang, C.M. and Luo, G. Purification of a novel RECQL5-SWI/SNF-RNAPII super complex Int J Biochem Mol Biol. 1(1): 101-111 (2010) [Abstract]

  • Xu,Y., Boucher, J.M. and Morel, F.M.M. Expression and Diversity of Alkaline Phosphatase EHAP1 in Emiliania Huxleyi (Prymnesiophyceae)Journal of Phycology Volume 46, Issue 1, pages 85–92, (2010) [Abstract]

  • Chen, Y.W., Wang, J.K., Chou, F.P., Chen, C.Y., Rorke, E.A., Chen, L.M., Chai, K.X., Eckert, R.L., Johnson, M.D. and Lin, C.Y. Expand Regulation of the Matriptase-Prostasin Cell Surface Proteolytic Cascade by Hepatocyte Growth Factor Activator Inhibitor-1 during Epidermal Differentiation The Journal of Biological Chemistry, 285, 31755-31762 (2010) [Abstract]

  • Wilson, J.D. and Barlowe, B. Yet1p and Yet3p, the Yeast Homologs of BAP29 and BAP31, Interact with the Endoplasmic Reticulum Translocation Apparatus and Are Required for Inositol Prototrophy The Journal of Biological Chemistry, 285, 18252-18261 (2010) [Abstract]

  • Goo, Y.H. and Cooper T.A. CUGBP2 directly interacts with U2 17S snRNP components and promotes U2 snRNA binding to cardiac troponin T pre-mRNA Nucleic Acids Research, Jul. 37(13):4275-4286 (2009) [Abstract]

  • Yan, LJ and Forster MJ. Resolving mitochondrial protein complexes using nongradient blue native polyacrylamide gel electrophoresisAnalytical Biochemistry June 2009 Vol. 389(2):143-149 (2009) [Abstract]

  • Teijeiro, JM, Ignotz, GG and Marini, PE. Annexin A2 is involved in pig (Sus scrofa)sperm-oviduct interaction Molecular Reproduction and Development April 76(4):334-41 (2009) [Abstract]

  • Davie, JJ and Campagnari, AA. Comparative proteomic analysis of the Haemophilus ducreyi porin-deficient mutant 35000HP::P2AB. J. Bacteriol. April 2009, p. 2144-2152, Vol. 191, No. 7 (2009) [Abstract]

  • Hazelwood, LA, Free, RB, Cabrera, DM, Skinbjerg, M and Sibley, DR. Reciprocal Modulation of Function between the D1 and D2 Dopamine Receptors and the Na+,K+-ATPase. J. Biol. Chem., Vol. 283, Issue 52, 36441-36453, December 26, (2008) [Abstract]

  • Jiang, XR, Wang, P, Fu, X and Zhu, BT. Chemical synthesis and biochemical characterization of a biotinylated derivative of 17β-estradiol with a long side chain covalently attached to its C-7α position. Steroids Volume 73, Issue 12, November 2008, Pages 1252-1261 (2008)[Abstract]

  • Krawczyka, E, Hanoverb, JA, Schlegela, R and Suprynowicz, FA. Karyopherin β3: A new cellular target for the HPV-16 E5 oncoprotein.Biochemical and Biophysical Research Communications Volume 371, Issue 4, 11 July 2008, Pages 684-688 (2008) [Abstract]

  • Adepu Kiran Kumara and Pranab Goswami. Purification and properties of a novel broad substrate specific alcohol oxidase from Aspergillus terreus MTCC 6324. Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics Volume 1784, Issue 11, November 2008, Pages 1552-1559 (2008) [Abstract]

  • Oh AS, Lahusen JT, Chien CD, Fereshteh MP,  Zhang X, Dakshanamurthy S, Xu, J,Kagan BL, Wellstein A and Riegel AT. Tyrosine phosphorylation of the nuclear receptor coactivator AIB1/SRC-3 is enhanced by Abl kinase and is required for its activity in cancer cells. Mol. Cell. Biol. November 2008, p. 6580-6593, Vol. 28, No. 21 (2008) [Abstract]

  • Ozsvari B, Hegyi P, Sahin-Toth M. The Guinea Pig Pancreas Secretes a Single Trypsinogen Isoform, Which Is Defective in Autoactivation.Pancreas. 37(2):182-188, August (2008). [Abstract]

  • Loehfelm TW, Luke NR, and Campagnari AA. Identification and Characterization of an Acinetobacter baumannii Biofilm-Associated Protein. J. Bacteriology, 190(3), 1036-1044, (2008) [Abstract]

  • Patent WO/2007/005244 Henipavirus receptor and uses thereof, 11/1/2007 [Abstract]

  • North SH, Kirtland SE and Nakai H. Translation factor IF2 at the interface of transposition and replication by the PriA-PriC pathway. Molecular Microbiology 66 (6), 1566–1578. (2007) [Abstract]

  • United States Patent 20070128200, Growth arrest specific gene 6 peptides, antibodies, compositions, methods and uses, 06/07/2007[Abstract]

  • Chowdhury A., Mukhopadhyay J., Tharun S. The decapping activator Lsm1p-7p–Pat1p complex has the intrinsic ability to distinguish between oligoadenylated and polyadenylated RNAs. RNA 13:998-1016 (2007) [Abstract]

  • Free RB, Hazelwood LA, Namkung Y. Cabrera DM, Spalding HN, and Sibley DR. D1 and D2 Dopamine Receptor Expression is Regulated by Direct Interaction with the Chaperone Protein Calnexin. J. Biol. Chem., 282(29):21285-300 (2007) [Abstract]

  • Nusinow DA, Hernández-Muñoz I, Fazzio TG, Shah GM, Kraus WL, and Panning B. Poly(ADP-ribose) Polymerase 1 Is Inhibited by a Histone H2A Variant, MacroH2A, and Contributes to Silencing of the Inactive X Chromosome. J. Biol. Chem., 282(17), 12851-12859, (2007) [Abstract]

  • Shi Y, Dodson GE, Mukhopadhyay PS, Shanware NP, Trinh AT, Tibbetts RS. Identification of Carboxyl-terminal MCM3 Phosphorylation Sites Using Polyreactive Phosphospecific Antibodies. J. Biol. Chem., 282(12) 9236-9243 (2007) [Abstract]

  • Rickards B, Flint SJ, Cole MD, LeRoy G. Nucleolin Is Required for RNA Polymerase I Transcription In Vivo. Molecular and Cellular Biology, 27(3) 937-948 (2007) [Abstract]

  • Xu Y, Wahlund TM, Feng L, Shaked Y, Morel FMM. A Novel Alkaline Phosphatase In The Coccolithophore Emiliania Huxleyi (Prymnesiophyceae) And Its Regulation By Phosphorus. J. of Phycology 42 (4), 835–844 (2006) [Abstract]

  • Zeng G, Aldridge ME, Tian X, Seiler D, Zhang X, Jin Y, Rao J, Li W, Chen D, Langford MP, Duggan C, Belldegrun AS, Dubinett SM. Dendritic Cell Surface Calreticulin Is a Receptor for NY-ESO-1: Direct Interactions between Tumor-Associated Antigen and the Innate Immune System.The Journal of Immunology, 177: 3582-3589 (2006) [Abstract]

  • Kim BJ, Hood BL, Aragon RA, Hardwick JP, Conrads TP, Veenstra TD, Song BJ. Increased oxidation and degradation of cytosolic proteins in alcohol-exposed mouse liver and hepatoma cells. Proteomics. 6(4): 1250–1260 (2006) [Abstract]

  • Ono K, Yu R, Mohri K, Ono S. Caenorhabditis elegans Kettin, a Large Immunoglobulin-like Repeat Protein, Binds to Filamentous Actin and Provides Mechanical Stability to the Contractile Apparatuses in Body Wall Muscle. Mol Biol Cell. 17(6): 2722–2734 (2006) [Abstract]

  • Bernier M, Kwon YK, Pandey SK, Zhu TN, Zhao RJ, Maciuk A, He HJ, Decabo R, Kole S. Binding of manumycin A inhibits IkappaB kinase beta activityJ Biol Chem. 3;281(5):2551-61 (2006) [Abstract]

  • Ferraro D, Corso S, Fasano E, Panieri E, Santangelo R, Borrello S, Giordano S, Pani G, Galeotti T. Pro-metastatic signaling by c-Met through RAC-1 and reactive oxygen species (ROS). Oncogene. (2006) [Abstract]

  • Shi Y, Dodson GE, Shaikh S, Rundell K, Tibbetts RS. Ataxia-telangiectasia-mutated (ATM) Is a T-antigen Kinase That Controls SV40 Viral Replication in Vivo. J Biol Chem. 2;280(48):40195-200 (2005). [Abstract]

  • Fisher PW, Brigham-Burke M, Wu SJ, Luo J, Carton J, Staquet K, Gao W, Jackson S, Bethea D, Chen C, Hu B, Giles-Komar J, Yang J. A novel site contributing to growth-arrest-specific gene 6 binding to its receptors as revealed by a human monoclonal antibody. Biochem J. 1;387(Pt 3):727-35 (2005). [Abstract]

  • He L, and Lemasters JJ. Dephosphorylation of the Rieske iron-sulfur protein after induction of the mitochondrial permeability transition.Biochem Biophys Res Commun. 2;334(3):829-37 (2005). [Abstract]

  • Negrete OA, Levroney EL, Aguilar HC, Bertolotti-Ciarlet A, Nazarian R, Tajyar S, Lee B. EphrinB2 is the entry receptor for Nipah virus, an emergent deadly paramyxovirus. Nature 436, 401-5 (2005). [Abstract]

  • Torrado M, Senatorov VV, Trivedi R, Fariss RN, Tomarev SI. Pdlim2, a novel PDZ-LIM domain protein, interacts with alpha-actinins and filamin A. Invest Ophthalmol Vis Sci. 45(11):3955-63 (2004) [Abstract]